50% Wholewheat Community Bake - Joze's version

Many people wanted to get details how to make the bread with translucent alveoli walls which I have published in the community bake 50% wholewheat thread. So I promised to make notes about the process. However, this bread was not made with sourdough starter but rather with tomato and basil yeast water.
For those who don't like to read too much here are the major differences to what most of people usually do: